Archaeoglobus profundus DSM 5631

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Archaeoglobi

Order

Archaeoglobales

Family

Archaeoglobaceae

Genus

Archaeoglobus

Description

Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) is a hyperthermophilic archaeon isolated from a deep sea hydrothermal vent in the Guaymas Basin in the Gulf of California. It grows organoheterotrophically using a variety of carbon and energy sources, but can also grow lithoautotrophically on hydrogen, thiosulphate and carbon dioxide. A. profundus is a chemolithoautotrophic or chemoorganotrophic microorganism using sulfate, sulfite or thiosulfate as electron receptor, with the formation of hydrogen sulfide as the end product. A. profundus thrives at 85 degrees Celsius the optimal temperature for growth. (HAMAP: ARCPA)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Archaeoglobi
Order	Archaeoglobales
Family	Archaeoglobaceae
Genus	Archaeoglobus
Species	Archaeoglobus profundus
Strain	DSM 5631

Profile

Physiology
Gram staining properties	Na
Shape	Cocci
Mobility	Yes
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobic
Optimal temperature	Not Available
Temperature range	Hyperthermophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Pairs - Singles
Sporulation	Nonsporulating
Energy source	Chemolithoautotroph
Pathogenicity	No

Genome Summary

Archaeoglobus profundus DSM 5631 plasmid pArcpr01, complete

NC_013742.1 NC_013741.1

Gene Summary

Adenine Count

892 bp

Thymine Count

793 bp

Guanine Count

568 bp

Cytosine Count

548 bp

Genome Length

2801 bp

Protein-coding Genes

5 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
Trna-val	Not Available	Not Available	Positive	338626 - 338698	Not Available
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo	ARCPR_RS10170	Not Available	Positive	338769 - 339164	14786.3
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo	ARCPR_RS10175	Not Available	Positive	340158 - 340238	3255.75
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo	ARCPR_RS10180	Not Available	Positive	340242 - 340490	8928.15
dna-directed dna polymerase ii small subunit	ARCPR_RS02000	Not Available	Negative	340473 - 341912	54030.1
cell division protein	ARCPR_RS02005	Not Available	Positive	341995 - 342903	34129.8
stage ii sporulation protein m	ARCPR_RS02010	Not Available	Negative	342890 - 343432	19811.2
dna-binding protein alba	ARCPR_RS02015	Not Available	Positive	343493 - 343765	9813.95
translin	ARCPR_RS02020	Not Available	Positive	343789 - 344430	24837.0
vwa domain-containing protein	ARCPR_RS02025	Not Available	Negative	344399 - 345691	48970.5

Displaying genes 451 – 460 of 1417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003878	(2S)-2-phospholactateC3H4O6P		Not available	Average167.034Da Monoisotopic166.976195587Da
BASm0039655	Achromobacter xylosoxidans A8	Not available	Not available	Not available
BASm0039764	Bacteroides eggerthii	Not available	Not available	Not available
BASm0039765	Burkholderiales bacterium 1_1_47	Not available	Not available	Not available
BASm0040295	Archaeoglobus profundus DSM 5631	Not available	Not available	Not available

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.