Archaeoglobus profundus DSM 5631

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Archaeoglobi

Order

Archaeoglobales

Family

Archaeoglobaceae

Genus

Archaeoglobus

Description

Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) is a hyperthermophilic archaeon isolated from a deep sea hydrothermal vent in the Guaymas Basin in the Gulf of California. It grows organoheterotrophically using a variety of carbon and energy sources, but can also grow lithoautotrophically on hydrogen, thiosulphate and carbon dioxide. A. profundus is a chemolithoautotrophic or chemoorganotrophic microorganism using sulfate, sulfite or thiosulfate as electron receptor, with the formation of hydrogen sulfide as the end product. A. profundus thrives at 85 degrees Celsius the optimal temperature for growth. (HAMAP: ARCPA)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassArchaeoglobi
OrderArchaeoglobales
FamilyArchaeoglobaceae
GenusArchaeoglobus
SpeciesArchaeoglobus profundus
StrainDSM 5631

Profile

Physiology
Gram staining propertiesNa
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Archaeoglobus profundus DSM 5631 plasmid pArcpr01, complete

Gene Summary

Adenine Count

892 bp

Thymine Count

793 bp

Guanine Count

568 bp

Cytosine Count

548 bp

Genome Length

2801 bp

Protein-coding Genes

5 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 2 proteinARCPR_RS05980Not AvailableNegative1012398 - 101350441629.8
glycosyltransferase family 4 proteinARCPR_RS05985Not AvailableNegative1013470 - 101460043623.5
glucose-1-phosphate thymidylyltransferaseARCPR_RS05990Not AvailablePositive1014662 - 101571738912.1
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoARCPR_RS10195Not AvailablePositive1015722 - 101610514135.8
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoARCPR_RS10200Not AvailablePositive1016094 - 101759058324.1
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoARCPR_RS10205Not AvailablePositive1017591 - 101823525078.0
abrb/maze/spovt family dna-binding domain-containing proteinARCPR_RS06005Not AvailablePositive1018268 - 10185139706.87
type ii toxin-antitoxin system vapc family toxinARCPR_RS06010Not AvailablePositive1018500 - 101891615663.4
dtdp-4-dehydrorhamnose reductaseARCPR_RS06015Not AvailablePositive1018922 - 101979732798.6
dtdp-4-dehydrorhamnose 3,5-epimerase family proteinARCPR_RS06020Not AvailablePositive1019797 - 102029419519.4

Displaying genes 1271 – 1280 of 1417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003878(2S)-2-phospholactateC3H4O6PChemical structure of (2S)-2-phospholactateNot available
Average167.034Da
Monoisotopic166.976195587Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039764Bacteroides eggerthiiNot availableNot availableNot available
BASm0039765Burkholderiales bacterium 1_1_47Not availableNot availableNot available
BASm0040295Archaeoglobus profundus DSM 5631Not availableNot availableNot available

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.