Archaeoglobus profundus DSM 5631

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Archaeoglobi

Order

Archaeoglobales

Family

Archaeoglobaceae

Genus

Archaeoglobus

Description

Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) is a hyperthermophilic archaeon isolated from a deep sea hydrothermal vent in the Guaymas Basin in the Gulf of California. It grows organoheterotrophically using a variety of carbon and energy sources, but can also grow lithoautotrophically on hydrogen, thiosulphate and carbon dioxide. A. profundus is a chemolithoautotrophic or chemoorganotrophic microorganism using sulfate, sulfite or thiosulfate as electron receptor, with the formation of hydrogen sulfide as the end product. A. profundus thrives at 85 degrees Celsius the optimal temperature for growth. (HAMAP: ARCPA)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Archaeoglobi
Order	Archaeoglobales
Family	Archaeoglobaceae
Genus	Archaeoglobus
Species	Archaeoglobus profundus
Strain	DSM 5631

Profile

Physiology
Gram staining properties	Na
Shape	Cocci
Mobility	Yes
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobic
Optimal temperature	Not Available
Temperature range	Hyperthermophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Pairs - Singles
Sporulation	Nonsporulating
Energy source	Chemolithoautotroph
Pathogenicity	No

Genome Summary

Archaeoglobus profundus DSM 5631 plasmid pArcpr01, complete

NC_013742.1 NC_013741.1

Gene Summary

Adenine Count

892 bp

Thymine Count

793 bp

Guanine Count

568 bp

Cytosine Count

548 bp

Genome Length

2801 bp

Protein-coding Genes

5 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
cytochrome b/b6 domain-containing protein	ARCPR_RS05020	Not Available	Negative	842792 - 843454	25536.3
nickel-dependent hydrogenase large subunit	ARCPR_RS05025	Not Available	Negative	843461 - 845185	64283.2
hydrogenase small subunit	ARCPR_RS05030	Not Available	Negative	845196 - 846254	38428.6
s-methyl-5'-thioadenosine phosphorylase	ARCPR_RS05035	Not Available	Negative	846379 - 847227	31563.5
phosphoribosyltransferase	ARCPR_RS05040	Not Available	Negative	847266 - 847925	25466.9
rna 2'-phosphotransferase	ARCPR_RS05045	Not Available	Negative	847922 - 848554	24577.8
duf531 domain-containing protein	ARCPR_RS05050	Not Available	Negative	848542 - 849057	19887.2
indolepyruvate ferredoxin oxidoreductase subunit beta	ARCPR_RS05055	Not Available	Positive	849106 - 849678	20204.8
Trna-val	Not Available	Not Available	Positive	849711 - 849783	Not Available
abc transporter atp-binding protein	ARCPR_RS05065	Not Available	Negative	850025 - 850798	28234.8

Displaying genes 1071 – 1080 of 1417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003878	(2S)-2-phospholactateC3H4O6P		Not available	Average167.034Da Monoisotopic166.976195587Da
BASm0039655	Achromobacter xylosoxidans A8	Not available	Not available	Not available
BASm0039764	Bacteroides eggerthii	Not available	Not available	Not available
BASm0039765	Burkholderiales bacterium 1_1_47	Not available	Not available	Not available
BASm0040295	Archaeoglobus profundus DSM 5631	Not available	Not available	Not available

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.