Daejeonella lutea

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Daejeonella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusDaejeonella
SpeciesDaejeonella lutea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter luteus strain DSM 22385 genome assembly, contig:

Gene Summary

Adenine Count

1162881 bp

Thymine Count

1162303 bp

Guanine Count

849407 bp

Cytosine Count

853200 bp

Genome Length

4028641 bp

Protein-coding Genes

3562 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN05661099_2790Not AvailableNegative3075822 - 307689839464.3
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseSAMN05661099_2791Not AvailablePositive3077131 - 307791029495.8
d-3-phosphoglycerate dehydrogenaseSAMN05661099_2792Not AvailablePositive3077917 - 307884034510.6
transcription elongation factor greaSAMN05661099_2794Not AvailablePositive3079177 - 307965017125.4
histidine triad (hit) family proteinSAMN05661099_2795Not AvailablePositive3079757 - 308014914663.2
holliday junction endonuclease ruvcSAMN05661099_2796Not AvailableNegative3080174 - 308074020850.6
hypothetical proteinSAMN05661099_2797Not AvailablePositive3080827 - 308180136926.9
glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthaseSAMN05661099_2798Not AvailablePositive3081782 - 308291542742.3
sigma-b regulation protein rsbu (phosphoserine phosphatase)SAMN05661099_2799Not AvailablePositive3082977 - 308422146422.9
rnase hiiSAMN05661099_2800Not AvailablePositive3084271 - 308487622958.4

Displaying genes 2761 – 2770 of 3604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.