Daejeonella lutea

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Daejeonella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusDaejeonella
SpeciesDaejeonella lutea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter luteus strain DSM 22385 genome assembly, contig:

Gene Summary

Adenine Count

1162881 bp

Thymine Count

1162303 bp

Guanine Count

849407 bp

Cytosine Count

853200 bp

Genome Length

4028641 bp

Protein-coding Genes

3562 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development)SAMN05661099_2509Not AvailablePositive2745466 - 274686352756.8
gliding motility-associated lipoprotein gldhSAMN05661099_2510Not AvailablePositive2746863 - 274733917981.4
two component transcriptional regulator, luxr familySAMN05661099_2511Not AvailableNegative2747533 - 274816823955.6
signal transduction histidine kinaseSAMN05661099_2512Not AvailableNegative2748165 - 274999769368.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN05661099_2513Not AvailableNegative2750045 - 275135248153.6
zinc carboxypeptidaseSAMN05661099_2514Not AvailablePositive2751481 - 275398293642.7
phage shock protein c (pspc) family proteinSAMN05661099_2515Not AvailableNegative2754013 - 275557859620.4
padr family transcriptional regulator, regulatory protein padrSAMN05661099_2516Not AvailableNegative2755575 - 275599115608.7
tonb-linked outer membrane protein, susc/raga familySAMN05661099_2517Not AvailablePositive2756448 - 2759618115569.0
starch-binding associating with outer membraneSAMN05661099_2518Not AvailablePositive2759639 - 276109652726.2

Displaying genes 2481 – 2490 of 3604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.