Sphingobium faniae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium faniae is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at 29.0°C. As a non-spore-forming organism, S. faniae relies on vegetative growth for reproduction, which is characteristic of many bacteria in its phylogenetic lineage. The Gram-negative nature of S. faniae suggests a complex cell wall structure that includes an outer membrane containing lipopolysaccharides, contributing to its distinctive biochemical properties. Its rod shape is typical of many bacteria, allowing for motility and surface attachment, which may be advantageous in its aerobic habitat. The preference for an optimal temperature of 29.0°C indicates that S. faniae may be well-suited for environments that are temperate, potentially including soil or aquatic ecosystems where such conditions are prevalent. This temperature range may also suggest that it could play a role in biogeochemical processes typical of temperate climates, such as nutrient cycling. The aerobic nature of S. faniae emphasizes its dependence on molecular oxygen for its metabolic processes, which may include the degradation of various organic compounds. This trait positions S. faniae as a potential player in bioremediation, particularly in environments contaminated with organic pollutants, where its metabolic capabilities could facilitate the breakdown of complex substances in the presence of oxygen. Thus, Sphingobium faniae may contribute to the ecological dynamics of its habitat by participating in the degradation of organic matter, thereby influencing nutrient availability and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium faniae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingobium faniae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium faniae strain CGMCC 1.7749 genome assembly, contig:

Gene Summary

Adenine Count

889130 bp

Thymine Count

888110 bp

Guanine Count

1532283 bp

Cytosine Count

1529725 bp

Genome Length

4840393 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 4,5-dioxygenase alpha subunitSAMN02927924_04181Not AvailablePositive4227226 - 422762415280.2
protocatechuate 4,5-dioxygenase beta subunitSAMN02927924_04182Not AvailablePositive4227626 - 422847131465.6
pimeloyl-acp methyl ester carboxylesteraseSAMN02927924_04183Not AvailablePositive4228482 - 422918924829.8
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenaseSAMN02927924_04184Not AvailablePositive4229212 - 423016834832.3
predicted oxidoreductaseSAMN02927924_04185Not AvailablePositive4230165 - 423117536881.4
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN02927924_04186Not AvailablePositive4231237 - 423249343767.6
dihydrolipoamide dehydrogenaseSAMN02927924_04187Not AvailablePositive4232495 - 423390749772.6
pyruvate dehydrogenase e1 component alpha subunitSAMN02927924_04188Not AvailablePositive4233923 - 423499639391.9
pyruvate dehydrogenase e1 component beta subunitSAMN02927924_04189Not AvailablePositive4234996 - 423634247690.4
reductase c-terminalSAMN02927924_04190Not AvailablePositive4236501 - 423776344359.2

Displaying genes 4171 – 4180 of 4835 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.