Sphingobium faniae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium faniae is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at 29.0°C. As a non-spore-forming organism, S. faniae relies on vegetative growth for reproduction, which is characteristic of many bacteria in its phylogenetic lineage. The Gram-negative nature of S. faniae suggests a complex cell wall structure that includes an outer membrane containing lipopolysaccharides, contributing to its distinctive biochemical properties. Its rod shape is typical of many bacteria, allowing for motility and surface attachment, which may be advantageous in its aerobic habitat. The preference for an optimal temperature of 29.0°C indicates that S. faniae may be well-suited for environments that are temperate, potentially including soil or aquatic ecosystems where such conditions are prevalent. This temperature range may also suggest that it could play a role in biogeochemical processes typical of temperate climates, such as nutrient cycling. The aerobic nature of S. faniae emphasizes its dependence on molecular oxygen for its metabolic processes, which may include the degradation of various organic compounds. This trait positions S. faniae as a potential player in bioremediation, particularly in environments contaminated with organic pollutants, where its metabolic capabilities could facilitate the breakdown of complex substances in the presence of oxygen. Thus, Sphingobium faniae may contribute to the ecological dynamics of its habitat by participating in the degradation of organic matter, thereby influencing nutrient availability and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium faniae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingobium faniae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium faniae strain CGMCC 1.7749 genome assembly, contig:

Gene Summary

Adenine Count

889130 bp

Thymine Count

888110 bp

Guanine Count

1532283 bp

Cytosine Count

1529725 bp

Genome Length

4840393 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integrase core domain-containing proteinSAMN02927924_03501Not AvailableNegative3507572 - 350898753820.6
hnh endonucleaseSAMN02927924_03502Not AvailableNegative3509191 - 350999129577.8
methyltransferase domain-containing proteinSAMN02927924_03503Not AvailableNegative3509988 - 3514055150193.0
snf2 family n-terminal domain-containing proteinSAMN02927924_03504Not AvailableNegative3514055 - 3516856102339.0
helicase conserved c-terminal domain-containing proteinSAMN02927924_03505Not AvailableNegative3516853 - 3521967188874.0
dna repair exonuclease sbccd atpase subunitSAMN02927924_03506Not AvailableNegative3522133 - 352476394897.9
dna repair exonuclease sbccd nuclease subunitSAMN02927924_03507Not AvailableNegative3524760 - 352586941233.2
uncharacterized proteinSAMN02927924_03508Not AvailableNegative3525873 - 3529172119365.0
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN02927924_03509Not AvailablePositive3529278 - 353026136867.6
res domain-containing proteinSAMN02927924_03510Not AvailableNegative3530963 - 353147218583.2

Displaying genes 3491 – 3500 of 4835 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.