Methylovirgula ligni str. BW863

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Beijerinckiaceae

Genus

Methylovirgula

Description

Methylovirgula ligni strain BW863 is a Gram-negative, rod-shaped bacterium characterized by its adaptation to a low-temperature environment, with an optimal growth temperature of 16.0 °C. This psychrotolerant microbe is likely to thrive in cold habitats, where it may play a role in the degradation of organic compounds, particularly in environments with limited nutrient availability. The rod shape of Methylovirgula ligni str. BW863 suggests a potential for motility, which may aid in its survival and colonization within its ecological niche. Gram-negative bacteria, including this strain, are known for their complex cell wall structure, which can influence their interactions with surrounding microorganisms and abiotic factors in the environment. Given its specific adaptation to lower temperatures, Methylovirgula ligni str. BW863 may contribute to biogeochemical cycles in cold ecosystems, such as tundra soils or deep-sea environments. Its metabolic processes could facilitate the breakdown of organic matter, impacting carbon cycling and nutrient availability in these ecosystems. Further research into its metabolic pathways could provide insights into its role within microbial communities and its potential applications in biotechnology, particularly in bioremediation or bioenergy production in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBeijerinckiaceae
GenusMethylovirgula
SpeciesMethylovirgula ligni
StrainBW863

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylovirgula ligni strain BW863 Ga0244540_18, whole genome

Gene Summary

Adenine Count

621589 bp

Thymine Count

619725 bp

Guanine Count

1024719 bp

Cytosine Count

1026494 bp

Genome Length

3292724 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fkbm family methyltransferaseDES32_1948Not AvailableNegative1967084 - 196785728022.9
atp-binding protein involved in chromosome partitioningDES32_1949Not AvailableNegative1967899 - 196899938326.8
nitt/taut family transport system substrate-binding proteinDES32_1950Not AvailableNegative1969071 - 197008434704.9
uncharacterized protein duf3604DES32_1951Not AvailablePositive1970232 - 197255984151.4
nitt/taut family transport system permease proteinDES32_1952Not AvailablePositive1972556 - 197331427348.2
nitt/taut family transport system atp-binding proteinDES32_1953Not AvailablePositive1973311 - 197408127840.0
valyl-trna synthetaseDES32_1954Not AvailableNegative1974085 - 1976904105137.0
hypothetical proteinDES32_1955Not AvailableNegative1977107 - 197784726490.5
outer membrane proteinDES32_1956Not AvailableNegative1978019 - 197949152511.9
protein-l-isoaspartate(d-aspartate) o-methyltransferaseDES32_1957Not AvailableNegative1979704 - 198041424901.8

Displaying genes 1961 – 1970 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.