Methylovirgula ligni str. BW863

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Beijerinckiaceae

Genus

Methylovirgula

Description

Methylovirgula ligni strain BW863 is a Gram-negative, rod-shaped bacterium characterized by its adaptation to a low-temperature environment, with an optimal growth temperature of 16.0 °C. This psychrotolerant microbe is likely to thrive in cold habitats, where it may play a role in the degradation of organic compounds, particularly in environments with limited nutrient availability. The rod shape of Methylovirgula ligni str. BW863 suggests a potential for motility, which may aid in its survival and colonization within its ecological niche. Gram-negative bacteria, including this strain, are known for their complex cell wall structure, which can influence their interactions with surrounding microorganisms and abiotic factors in the environment. Given its specific adaptation to lower temperatures, Methylovirgula ligni str. BW863 may contribute to biogeochemical cycles in cold ecosystems, such as tundra soils or deep-sea environments. Its metabolic processes could facilitate the breakdown of organic matter, impacting carbon cycling and nutrient availability in these ecosystems. Further research into its metabolic pathways could provide insights into its role within microbial communities and its potential applications in biotechnology, particularly in bioremediation or bioenergy production in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBeijerinckiaceae
GenusMethylovirgula
SpeciesMethylovirgula ligni
StrainBW863

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylovirgula ligni strain BW863 Ga0244540_18, whole genome

Gene Summary

Adenine Count

621589 bp

Thymine Count

619725 bp

Guanine Count

1024719 bp

Cytosine Count

1026494 bp

Genome Length

3292724 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDES32_0081Not AvailableNegative90992 - 911746758.33
atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase moduleDES32_0082Not AvailableNegative91242 - 9381895463.1
dna end-binding protein kuDES32_0083Not AvailableNegative93831 - 9470032484.0
putative membrane protein yeaq/ymge (transglycosylase-associated protein family)DES32_0084Not AvailablePositive95016 - 952738910.54
multiple antibiotic resistance proteinDES32_0085Not AvailablePositive95367 - 9599321863.8
homoserine o-succinyltransferaseDES32_0086Not AvailableNegative96001 - 9699636522.3
o-acetylhomoserine sulfhydrylaseDES32_0087Not AvailableNegative96993 - 9831547623.6
fatty-acyl-coa synthaseDES32_0088Not AvailablePositive98529 - 10029564289.9
acetyl esterase/lipaseDES32_0089Not AvailableNegative100290 - 10120132251.6
branched-chain amino acid aminotransferaseDES32_0090Not AvailablePositive101338 - 10221332443.7

Displaying genes 111 – 120 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.