Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | W |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1204718 bp
Thymine Count
1204420 bp
Guanine Count
1243673 bp
Cytosine Count
1248156 bp
Genome Length
4900968 bp
Protein-coding Genes
4340 genes
Non-Coding Genes
461 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | ECW_RS24100 | Not Available | Negative | 4841584 - 4843146 | 58868.0 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | ECW_RS24105 | Not Available | Negative | 4843397 - 4844287 | 34332.0 |
| 4-hydroxyphenylacetate permease | ECW_RS24110 | Not Available | Negative | 4844297 - 4845673 | 50571.6 |
| 4-hydroxy-2-oxoheptanedioate aldolase | ECW_RS24115 | Not Available | Negative | 4845848 - 4846636 | 28074.8 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | ECW_RS24120 | Not Available | Negative | 4846647 - 4847450 | 29716.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | ECW_RS24125 | Not Available | Negative | 4847561 - 4847941 | 14295.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ECW_RS24130 | Not Available | Negative | 4847951 - 4848802 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | ECW_RS24135 | Not Available | Negative | 4848804 - 4850270 | 53030.7 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | ECW_RS24140 | Not Available | Negative | 4850267 - 4851556 | 47111.0 |
| homoprotocatechuate degradation operon regulator hpar | ECW_RS24145 | Not Available | Positive | 4851828 - 4852274 | 17255.8 |
Pathways
12522 pathways
Health Effects
No health effects information available for this bacterium.





