Brachyspira hyodysenteriae WA1

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Brachyspirales

Family

Brachyspiraceae

Genus

Brachyspira

Description

Brachyspira hyodysenteriae is an anaerobic spirochete that is the causative agent of swine dysentery, severe inflammation of the large intestine with a bloody mucous diarrhea of pigs. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility. Many of the predicted CDS show a higher match to Escherichia (36%) and Clostridium (15%) than to other spirochete CDS (only 5%), and it is thought that their genes were probably acquired via horizontal gene transfer. About half of these Escherichia and Clostridium-like CDS are involved in metabolism, suggesting they enhance survival in the large intestine. It also has 123 predicted transport CDS, pathways for glycolysis, gluconeogenesis, a non-oxidative pentose phosphate pathway, nucleotide metabolism, lipopolysaccharide biosynthesis and a respiratory electron transport chain. ATP is probably generated by sugar metabolism. It has 314 putative virulence factors, including proteases, hemolysins, ankyrin proteins, potential type III secretion system and CDS involved in chemotaxis (adapted from http://www.thepigsite.com/diseaseinfo/116/swine-dysentery and PubMed 19262690). (HAMAP: BRAHW)

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderBrachyspirales
FamilyBrachyspiraceae
GenusBrachyspira
SpeciesBrachyspira hyodysenteriae
StrainWA1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Brachyspira hyodysenteriae WA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Brachyspira hyodysenteriae WA1, complete sequence.

Gene Summary

Adenine Count

1096773 bp

Thymine Count

1091851 bp

Guanine Count

409356 bp

Cytosine Count

402714 bp

Genome Length

3000694 bp

Protein-coding Genes

2576 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[fefe] hydrogenase h-cluster maturation gtpase hydfBHWA1_RS00255Not AvailablePositive56676 - 5786043942.2
[fefe] hydrogenase h-cluster radical sam maturase hydeBHWA1_RS00260Not AvailablePositive57885 - 5900642635.8
trkh family potassium uptake proteinBHWA1_RS00265Not AvailablePositive59096 - 6085365019.6
selenium cofactor biosynthesis protein yqecBHWA1_RS00270Not AvailablePositive60856 - 6204045773.1
uracil-xanthine permease family proteinBHWA1_RS00275Not AvailableNegative62136 - 6352148324.6
fad binding domain-containing proteinBHWA1_RS00280Not AvailableNegative63548 - 6439031219.9
(2fe-2s)-binding proteinBHWA1_RS00285Not AvailableNegative64381 - 6486917648.6
xanthine dehydrogenase family protein molybdopterin-binding subunitBHWA1_RS00290Not AvailableNegative64869 - 6700479226.3
carbamate kinaseBHWA1_RS00295Not AvailableNegative67167 - 6810833477.8
knotted carbamoyltransferase ygewBHWA1_RS00300Not AvailableNegative68239 - 6942944506.2

Displaying genes 51 – 60 of 2615 in total

Metabolites

418 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 418 metabolites

Health Effects

No health effects information available for this bacterium.