Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | POR16_RS24395 | Not Available | Positive | 5351234 - 5353726 | 94334.1 |
| hcp family type vi secretion system effector | POR16_RS24400 | Not Available | Positive | 5353882 - 5354400 | 18272.2 |
| type vi secretion system protein tssa | POR16_RS24405 | Not Available | Positive | 5354493 - 5355590 | 40029.1 |
| duf2628 domain-containing protein | POR16_RS24410 | Not Available | Positive | 5355798 - 5356223 | 16345.8 |
| hypothetical protein | POR16_RS24415 | Not Available | Positive | 5356259 - 5356579 | 11962.8 |
| paar domain-containing protein | POR16_RS24420 | Not Available | Positive | 5356677 - 5356931 | 8767.5 |
| phospholipase d-like domain-containing protein | POR16_RS24425 | Not Available | Positive | 5356982 - 5359030 | 77282.9 |
| duf6396 domain-containing protein | POR16_RS24430 | Not Available | Positive | 5359033 - 5360058 | 38511.7 |
| sel1 repeat family protein | POR16_RS24435 | Not Available | Positive | 5360156 - 5361181 | 38202.5 |
| hypothetical protein | POR16_RS24440 | Not Available | Positive | 5361251 - 5361577 | 11576.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
