Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | POR16_RS24345 | Not Available | Positive | 5336023 - 5337525 | 56047.2 |
| type vi secretion system baseplate subunit tsse | POR16_RS24350 | Not Available | Positive | 5337556 - 5338038 | 18202.9 |
| type vi secretion system baseplate subunit tssf | POR16_RS24355 | Not Available | Positive | 5338038 - 5339870 | 69747.9 |
| type vi secretion system baseplate subunit tssg | POR16_RS24360 | Not Available | Positive | 5339834 - 5340904 | 41003.3 |
| type vi secretion system atpase tssh | POR16_RS24365 | Not Available | Positive | 5340901 - 5343504 | 95230.2 |
| type vi secretion system lipoprotein tssj | POR16_RS24370 | Not Available | Positive | 5343529 - 5344284 | 27508.6 |
| type vi secretion system baseplate subunit tssk | POR16_RS24375 | Not Available | Positive | 5344281 - 5345624 | 50398.5 |
| type ivb secretion system protein icmh/dotu | POR16_RS24380 | Not Available | Positive | 5345621 - 5346334 | 26760.3 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | POR16_RS24385 | Not Available | Positive | 5346365 - 5350282 | 144207.0 |
| type vi secretion system-associated protein tagf | POR16_RS24390 | Not Available | Positive | 5350314 - 5351237 | 34692.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
