Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | POR16_RS01675 | Not Available | Positive | 346803 - 347030 | 8194.88 |
| thermonuclease family protein | POR16_RS01680 | Not Available | Positive | 347050 - 347853 | 28945.9 |
| malic enzyme-like nad(p)-binding protein | POR16_RS01685 | Not Available | Positive | 348036 - 349304 | 45152.6 |
| penicillin-binding protein 1a | POR16_RS01695 | Not Available | Negative | 349467 - 351911 | 89498.5 |
| pilus assembly protein pilm | POR16_RS01700 | Not Available | Positive | 352119 - 353183 | 38105.9 |
| piln domain-containing protein | POR16_RS01705 | Not Available | Positive | 353183 - 353758 | 21527.2 |
| type 4a pilus biogenesis protein pilo | POR16_RS01710 | Not Available | Positive | 353755 - 354378 | 23155.0 |
| type 4a pilus biogenesis lipoprotein pilp | POR16_RS01715 | Not Available | Positive | 354375 - 354902 | 19107.9 |
| type iv pilus secretin pilq | POR16_RS01720 | Not Available | Positive | 354950 - 357055 | 75459.2 |
| shikimate kinase arok | POR16_RS01725 | Not Available | Positive | 357060 - 357578 | 19117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
