Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein pilp | POR16_RS20510 | Not Available | Positive | 4561409 - 4562011 | 20875.9 |
| gspe/pule family protein | POR16_RS20515 | Not Available | Positive | 4562008 - 4563639 | 59454.7 |
| type ii secretion system f family protein | POR16_RS20520 | Not Available | Positive | 4563629 - 4564720 | 40104.3 |
| type 4 pilus major pilin | POR16_RS20525 | Not Available | Positive | 4564759 - 4565283 | 17940.2 |
| atpase, t2ss/t4p/t4ss family | POR16_RS20530 | Not Available | Positive | 4565286 - 4566218 | 33498.2 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | POR16_RS20535 | Not Available | Positive | 4566215 - 4567621 | 48615.7 |
| type iv pilus biogenesis protein pilm | POR16_RS20540 | Not Available | Positive | 4567653 - 4568093 | 15165.1 |
| hypothetical protein | POR16_RS20545 | Not Available | Negative | 4568121 - 4568330 | 7506.18 |
| tyrosine-type recombinase/integrase | POR16_RS20550 | Not Available | Negative | 4568547 - 4569503 | 34995.9 |
| sodium:proton antiporter | POR16_RS26695 | Not Available | Negative | 4569500 - 4570924 | 51621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
