Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | POR16_RS18915 | Not Available | Negative | 4220843 - 4222021 | 44625.6 |
| peroxide stress protein yaaa | POR16_RS18920 | Not Available | Positive | 4222225 - 4223004 | 29381.2 |
| nucleotide sugar dehydrogenase | POR16_RS18925 | Not Available | Positive | 4223811 - 4225127 | 47528.0 |
| mannuronan synthase | POR16_RS18930 | Not Available | Positive | 4225226 - 4226710 | 56185.2 |
| alginate biosynthesis protein alg44 | POR16_RS18935 | Not Available | Positive | 4226751 - 4227923 | 41929.6 |
| alginate biosynthesis tpr repeat lipoprotein algk | POR16_RS18940 | Not Available | Positive | 4227926 - 4229338 | 51173.6 |
| alginate export family protein | POR16_RS18945 | Not Available | Positive | 4229335 - 4230816 | 54757.1 |
| mannuronan 5-epimerase algg | POR16_RS18950 | Not Available | Positive | 4230843 - 4232450 | 59354.1 |
| alginate o-acetyltransferase algx-related protein | POR16_RS18955 | Not Available | Positive | 4232465 - 4233904 | 53473.0 |
| mannuronate-specific alginate lyase | POR16_RS18960 | Not Available | Positive | 4233913 - 4235049 | 42451.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
