Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system inner membrane ring lipoprotein sctj | POR16_RS18240 | Not Available | Negative | 4072845 - 4073654 | 29233.8 |
| type iii secretion system inner rod subunit scti | POR16_RS18245 | Not Available | Negative | 4073663 - 4074037 | 13105.6 |
| type iii secretion system effector hrpz | POR16_RS18250 | Not Available | Negative | 4074065 - 4075180 | 36579.9 |
| membrane protein | POR16_RS18255 | Not Available | Negative | 4075237 - 4075584 | 11460.5 |
| sigma 54-interacting transcriptional regulator | POR16_RS18260 | Not Available | Negative | 4075680 - 4076588 | 33285.4 |
| sigma 54-interacting transcriptional regulator | POR16_RS18265 | Not Available | Negative | 4076631 - 4077575 | 34803.2 |
| lytic transglycosylase domain-containing protein | POR16_RS18270 | Not Available | Negative | 4078635 - 4080191 | 56429.8 |
| avre-family type 3 secretion system effector | POR16_RS18275 | Not Available | Positive | 4080422 - 4085794 | 195645.0 |
| type iv secretion protein rhs | POR16_RS18280 | Not Available | Negative | 4085846 - 4085997 | 5806.94 |
| avre-family type 3 secretion system effector | POR16_RS18290 | Not Available | Positive | 4087249 - 4092102 | 176077.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
