Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | POR16_RS18095 | Not Available | Negative | 4047944 - 4048279 | 11826.5 |
| trna guanosine(34) transglycosylase tgt | POR16_RS18100 | Not Available | Negative | 4048332 - 4049447 | 40998.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | POR16_RS18105 | Not Available | Negative | 4049462 - 4050526 | 38766.1 |
| Trna-leu | Not Available | Not Available | Positive | 4050644 - 4050728 | Not Available |
| hcp family type vi secretion system effector | POR16_RS18115 | Not Available | Positive | 4051032 - 4051526 | 17809.9 |
| hypothetical protein | POR16_RS26895 | Not Available | Negative | 4051599 - 4051922 | 12157.4 |
| hypothetical protein | POR16_RS18120 | Not Available | Negative | 4051952 - 4052596 | 24105.8 |
| dna adenine methylase | POR16_RS18125 | Not Available | Negative | 4052687 - 4053481 | 30638.7 |
| type iv secretion protein rhs | POR16_RS18130 | Not Available | Negative | 4053639 - 4053845 | 7776.26 |
| type iii effector hrpk domain-containing protein | POR16_RS18135 | Not Available | Negative | 4054179 - 4056515 | 80637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
