Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | POR16_RS12955 | Not Available | Positive | 2864128 - 2865444 | 49399.1 |
| d-xylose abc transporter substrate-binding protein | POR16_RS12960 | Not Available | Positive | 2865584 - 2866585 | 35985.4 |
| d-xylose abc transporter atp-binding protein | POR16_RS12965 | Not Available | Positive | 2866693 - 2868258 | 56591.0 |
| sugar abc transporter permease | POR16_RS12970 | Not Available | Positive | 2868259 - 2869395 | 39929.4 |
| deoxyribose-phosphate aldolase | POR16_RS12975 | Not Available | Negative | 2869482 - 2870165 | 23147.8 |
| dna-binding transcriptional repressor deor | POR16_RS12980 | Not Available | Positive | 2870280 - 2871050 | 29049.1 |
| aldose 1-epimerase family protein | POR16_RS12985 | Not Available | Negative | 2871056 - 2872132 | 39375.8 |
| l-fucose:h+ symporter permease | POR16_RS12990 | Not Available | Negative | 2872129 - 2873460 | 48666.5 |
| ribokinase | POR16_RS12995 | Not Available | Negative | 2873516 - 2874436 | 32446.0 |
| Trna-gly | Not Available | Not Available | Positive | 2874684 - 2874759 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
