Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter permease subunit | POR16_RS12810 | Not Available | Positive | 2834796 - 2835476 | 23968.0 |
| molybdenum abc transporter atp-binding protein | POR16_RS12815 | Not Available | Positive | 2835480 - 2836568 | 39710.4 |
| dna topoisomerase ib | POR16_RS12820 | Not Available | Positive | 2836656 - 2837711 | 39662.0 |
| Trna-leu | Not Available | Not Available | Positive | 2837878 - 2837963 | Not Available |
| duf1852 domain-containing protein | POR16_RS12830 | Not Available | Positive | 2838389 - 2839372 | 37687.3 |
| methionine synthase | POR16_RS12835 | Not Available | Positive | 2839398 - 2840429 | 38701.3 |
| t3ss effector protein kinase hopbf1 | POR16_RS12840 | Not Available | Negative | 2840574 - 2841185 | 22686.9 |
| lytic polysaccharide monooxygenase auxiliary activity family 9 protein | POR16_RS12845 | Not Available | Negative | 2841566 - 2842309 | 27882.4 |
| xopah/avrb family type iii secretion system effector | POR16_RS12850 | Not Available | Negative | 2842910 - 2843875 | 35841.2 |
| is5 family transposase | POR16_RS12855 | Not Available | Positive | 2844202 - 2845055 | 33039.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
