Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | POR16_RS11340 | Not Available | Positive | 2489184 - 2490230 | 38149.4 |
| atp-binding protein | POR16_RS11345 | Not Available | Negative | 2490252 - 2493071 | 104443.0 |
| hypothetical protein | POR16_RS11350 | Not Available | Positive | 2493493 - 2493924 | 16282.5 |
| duf72 domain-containing protein | POR16_RS11355 | Not Available | Positive | 2493939 - 2494649 | 26552.6 |
| type iii effector hrpk domain-containing protein | POR16_RS11360 | Not Available | Positive | 2494893 - 2498213 | 118508.0 |
| response regulator | POR16_RS11365 | Not Available | Negative | 2498273 - 2498647 | 13457.1 |
| atp-binding protein | POR16_RS11370 | Not Available | Negative | 2498644 - 2501640 | 109301.0 |
| hypothetical protein | POR16_RS11375 | Not Available | Negative | 2502017 - 2502265 | 8981.33 |
| malate dehydrogenase (quinone) | POR16_RS11380 | Not Available | Negative | 2502423 - 2504060 | 59842.6 |
| (2fe-2s)-binding protein | POR16_RS11385 | Not Available | Positive | 2504980 - 2505660 | 23672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
