Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | POR16_RS11050 | Not Available | Positive | 2428534 - 2429541 | 38559.4 |
| type vi secretion system atpase tssh | POR16_RS11055 | Not Available | Positive | 2429551 - 2432154 | 94721.3 |
| sigma-54 interaction domain-containing protein | POR16_RS11060 | Not Available | Positive | 2432156 - 2433685 | 56003.5 |
| type vi secretion system-associated fha domain protein | POR16_RS11065 | Not Available | Positive | 2433892 - 2434686 | 29753.9 |
| type vi secretion system lipoprotein tssj | POR16_RS11070 | Not Available | Positive | 2434701 - 2435192 | 18484.3 |
| type vi secretion system baseplate subunit tssk | POR16_RS11075 | Not Available | Positive | 2435189 - 2436520 | 49191.1 |
| type ivb secretion system protein icmh/dotu | POR16_RS11080 | Not Available | Positive | 2436502 - 2437398 | 33878.5 |
| type vi secretion system membrane subunit tssm | POR16_RS11085 | Not Available | Positive | 2437407 - 2440910 | 131991.0 |
| metallophosphoesterase family protein | POR16_RS11090 | Not Available | Negative | 2440942 - 2441400 | 16662.2 |
| type iv secretion protein rhs | POR16_RS11095 | Not Available | Negative | 2441518 - 2442023 | 17837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
