Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. oryzae 1_6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas coronafaciens pv. oryzae str. 1_6 chromosome, complete
Gene Summary
Adenine Count
1194953 bp
Thymine Count
1189696 bp
Guanine Count
1637923 bp
Cytosine Count
1640365 bp
Genome Length
5662937 bp
Protein-coding Genes
4926 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | POR16_RS11000 | Not Available | Negative | 2417130 - 2417558 | 16378.9 |
| type iv secretion protein rhs | POR16_RS11005 | Not Available | Negative | 2417602 - 2418708 | 41170.4 |
| duf4123 domain-containing protein | POR16_RS11010 | Not Available | Negative | 2418698 - 2419579 | 34013.4 |
| type vi secretion system tip protein vgrg | POR16_RS11015 | Not Available | Negative | 2419576 - 2421597 | 75793.0 |
| hcp family type vi secretion system effector | POR16_RS11020 | Not Available | Negative | 2421666 - 2422181 | 19032.3 |
| type iv secretion protein rhs | POR16_RS11025 | Not Available | Positive | 2422677 - 2424223 | 58439.3 |
| type vi secretion system contractile sheath small subunit | POR16_RS11030 | Not Available | Positive | 2424258 - 2424755 | 18189.0 |
| type vi secretion system contractile sheath large subunit | POR16_RS11035 | Not Available | Positive | 2424789 - 2426264 | 55795.4 |
| type vi secretion system baseplate subunit tsse | POR16_RS11040 | Not Available | Positive | 2426280 - 2426690 | 15204.3 |
| type vi secretion system baseplate subunit tssf | POR16_RS11045 | Not Available | Positive | 2426783 - 2428570 | 67196.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
