Rickettsia peacockii str. Rustic

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rocky Mountain spotted fever (RMSF) was first recognized in the early 1900s as being due to R. rickettsii in Rocky Mountain wood ticks (Demacentor andersoni). Transmission to humans occurs principally through bites of infected ticks. Interestingly, in the Bitterroot Valley in western Montana almost all cases of RMSF are due to ticks collected on the west side; ticks on the east side of the valley, while infected with rickettsiae, do not cause disease in man. R. peacockii seems only to occur in ovarian tissues of D.andersoni; male ticks have not been seen to be infected. R.peacockii does not make a functional ompA, which may be a reason for its endosymbiotic nature in ticks (R.rickettsii is pathogenic in ticks). It is hypothesized that a high prevalence of R. peacockii in tick ovaries might interfere with maintenance and transmission of R. rickettsii. Strain Rustic (also known as DAE100R) was isolated from Rustic, Colorado (adapted from PubMed 9103635 and 15528527). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia peacockii
StrainRustic

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rickettsia peacockii str. Rustic
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence.

Gene Summary

Adenine Count

8609 bp

Thymine Count

8644 bp

Guanine Count

4381 bp

Cytosine Count

4772 bp

Genome Length

26406 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRPR_RS08925Not AvailableNegative295688 - 2959279154.22
ankyrin repeat domain-containing proteinRPR_RS08930Not AvailableNegative296098 - 29648414155.9
hypothetical proteinRPR_RS08935Not AvailableNegative296466 - 2966607846.53
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaRPR_RS01880Not AvailablePositive296827 - 29792441418.8
zinc-finger domain-containing proteinRPR_RS01885Not AvailablePositive298139 - 29918540399.8
is481-like element isrpe1 family transposaseRPR_RS01890Not AvailableNegative299386 - 30048041744.7
duf563 domain-containing proteinRPR_RS01895Not AvailableNegative300540 - 30110621827.9
5s ribosomal rnaNot AvailableNot AvailablePositive301512 - 301626Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive301899 - 304659Not Available
hypothetical proteinRPR_RS01915Not AvailableNegative304918 - 30533415505.8

Displaying genes 381 – 390 of 1510 in total

Metabolites

482 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da

Displaying 1–10 of 482 metabolites

Health Effects

No health effects information available for this bacterium.