Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella chilikensis |
| Strain | JC5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | sediment; water; Zipaquira salt mine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057314 bp
Thymine Count
1057402 bp
Guanine Count
1160877 bp
Cytosine Count
1164920 bp
Genome Length
4441258 bp
Protein-coding Genes
3934 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein nlpe involved in copper resistance | C8J23_12848 | Not Available | Negative | 3278043 - 3278516 | 17052.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | C8J23_12849 | Not Available | Positive | 3278726 - 3279289 | 20869.8 |
| hypothetical protein | C8J23_12850 | Not Available | Positive | 3279675 - 3280358 | 25154.2 |
| serine/threonine-protein kinase | C8J23_12851 | Not Available | Negative | 3280411 - 3283233 | 104288.0 |
| rna polymerase sigma factor (tigr02999 family) | C8J23_12852 | Not Available | Negative | 3283250 - 3283825 | 22069.5 |
| hypothetical protein | C8J23_1291 | Not Available | Negative | 3284600 - 3284947 | 12870.7 |
| hypothetical protein | C8J23_1292 | Not Available | Negative | 3285087 - 3285191 | 3970.73 |
| integron integrase | C8J23_1293 | Not Available | Positive | 3285712 - 3286674 | 36785.8 |
| tricorn protease | C8J23_1294 | Not Available | Negative | 3287074 - 3290298 | 119991.0 |
| membrane-associated pap2 superfamily phosphatase | C8J23_1295 | Not Available | Positive | 3290643 - 3291425 | 28807.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
