Delftia lacustris

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia lacustris is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives optimally at 25.0°C. This organism is notable for its ability to inhabit freshwater environments, specifically lakes, which is reflected in its species name. As a member of the genus Delftia, it contributes to the microbial diversity of aquatic ecosystems. The Gram-negative nature of Delftia lacustris indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interaction with the environment and other microorganisms. Its rod shape may confer certain advantages in motility and nutrient uptake, facilitating its adaptation to the aqueous habitats it occupies. While the specific ecological roles of Delftia lacustris are not detailed in the provided traits, its presence in freshwater systems suggests it may participate in various biogeochemical processes. Such processes could include the degradation of organic matter or interactions with other microbial communities, potentially influencing nutrient cycling within these ecosystems. Understanding the characteristics of Delftia lacustris may provide insights into the functional dynamics of freshwater microbiomes, particularly in the context of environmental change and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia lacustris
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Delftia lacustris
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatFresh water
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia lacustris strain LMG 24775 genome assembly, contig:

Gene Summary

Adenine Count

1215552 bp

Thymine Count

1207688 bp

Guanine Count

2364481 bp

Cytosine Count

2387261 bp

Genome Length

7174982 bp

Protein-coding Genes

6356 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05421547_1398Not AvailableNegative6704550 - 670617559064.4
ketopantoate reductaseSAMN05421547_1399Not AvailableNegative6706426 - 670722628005.9
nucleoside-diphosphate-sugar epimeraseSAMN05421547_13910Not AvailableNegative6707484 - 670856339486.8
dna-binding transcriptional regulator, merr familySAMN05421547_13911Not AvailablePositive6708636 - 670902514858.0
cobalt uptake substrate-specific transmembrane regionSAMN05421547_13912Not AvailablePositive6709228 - 670991124155.8
diguanylate cyclase (ggdef) domain-containing proteinSAMN05421547_13913Not AvailablePositive6710436 - 671160241887.9
aspartate racemaseSAMN05421547_13914Not AvailableNegative6711699 - 671241526410.9
helix-turn-helix domain-containing proteinSAMN05421547_13915Not AvailablePositive6712489 - 671330430360.6
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05421547_13916Not AvailablePositive6713674 - 671490644888.9
acyl-coa dehydrogenaseSAMN05421547_13917Not AvailablePositive6715264 - 671634337779.6

Displaying genes 6121 – 6130 of 6547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.