Cereibacter sphaeroides KD131

Gram-negativeRodMotileAerobe; anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Cereibacter

Description

Cereibacter sphaeroides KD131 is a Gram-negative, rod-shaped bacterium that typically forms chains and is capable of utilizing both photosynthetic processes and anaerobic respiration for energy. This microbe thrives optimally at a temperature of 25.0°C and exhibits versatility in its oxygen requirements, functioning as both an aerobe and an anaerobe. Cereibacter sphaeroides KD131 has been isolated from various habitats, suggesting a broad ecological niche. Its unique metabolic capabilities enable it to adapt to fluctuating environmental conditions, allowing for survival in diverse ecosystems. The photosynthetic ability of this bacterium indicates that it may play a critical role in carbon cycling within its habitats, contributing to the primary production of organic matter. Moreover, the ability to exist in both aerobic and anaerobic conditions suggests that Cereibacter sphaeroides KD131 could be instrumental in biogeochemical processes, potentially influencing nutrient dynamics in its environment. Understanding the ecological roles of such versatile microorganisms can provide insights into their contributions to ecosystem function and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusCereibacter
SpeciesCereibacter sphaeroides
StrainKD131

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Cereibacter sphaeroides KD131
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNot Available
Energy sourcePhotosynthetic
PathogenicityNot Available

Genome Summary

Cereibacter sphaeroides KD131 chromosome 1, complete sequence.

Gene Summary

Adenine Count

486115 bp

Thymine Count

485696 bp

Guanine Count

1086245 bp

Cytosine Count

1094735 bp

Genome Length

3152792 bp

Protein-coding Genes

2948 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin iii, nif-specificRSKD131_RS09030Not AvailableNegative1903700 - 190400211145.4
nifx-associated nitrogen fixation proteinRSKD131_RS09035Not AvailableNegative1904115 - 190458517308.6
nitrogen fixation protein nifxRSKD131_RS09040Not AvailableNegative1904582 - 190501615376.4
nitrogenase iron-molybdenum cofactor biosynthesis protein nifnRSKD131_RS09045Not AvailableNegative1905030 - 190639748155.6
nitrogenase iron-molybdenum cofactor biosynthesis protein nifeRSKD131_RS09050Not AvailableNegative1906397 - 190786052962.7
nitrogenase molybdenum-iron protein subunit betaRSKD131_RS09055Not AvailableNegative1908107 - 190962756142.6
nitrogenase molybdenum-iron protein alpha chainRSKD131_RS09060Not AvailableNegative1909728 - 191120954808.4
nitrogenase iron proteinRSKD131_RS09065Not AvailableNegative1911271 - 191214631531.1
sir2 family nad-dependent protein deacylaseRSKD131_RS09070Not AvailableNegative1912594 - 191342430294.4
putative nitrogen fixation protein niftRSKD131_RS09075Not AvailableNegative1913429 - 19136447880.64

Displaying genes 1871 – 1880 of 4491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

315 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 315 metabolites

Health Effects

No health effects information available for this bacterium.