Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transport system substrate-binding protein | SAMN04488124_0668 | Not Available | Positive | 608716 - 609747 | 37278.8 |
| zinc transport system atp-binding protein | SAMN04488124_0669 | Not Available | Positive | 609744 - 610484 | 26920.1 |
| zinc transport system permease protein | SAMN04488124_0670 | Not Available | Positive | 610487 - 611353 | 29854.7 |
| pas domain s-box-containing protein | SAMN04488124_0671 | Not Available | Negative | 611386 - 613179 | 66426.9 |
| hypothetical protein | SAMN04488124_0673 | Not Available | Positive | 613551 - 614738 | 40576.4 |
| putative transposase | SAMN04488124_0674 | Not Available | Negative | 614750 - 615973 | 46693.0 |
| hypothetical protein | SAMN04488124_0675 | Not Available | Negative | 615974 - 616096 | 4848.59 |
| endonuclease yncb, thermonuclease family | SAMN04488124_0676 | Not Available | Negative | 616295 - 618541 | 79578.4 |
| fe2+ transport protein | SAMN04488124_0677 | Not Available | Negative | 618840 - 619907 | 37702.3 |
| hypothetical protein | SAMN04488124_0678 | Not Available | Positive | 620009 - 620191 | 6272.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.