Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN04488124_0578 | Not Available | Negative | 533263 - 534516 | 42450.3 |
| 5'-phosphate synthase pdxt subunit | SAMN04488124_0579 | Not Available | Negative | 534692 - 535294 | 21493.1 |
| preprotein translocase subunit sec61beta | SAMN04488124_0580 | Not Available | Negative | 535376 - 535540 | 5662.87 |
| thioredoxin | SAMN04488124_0581 | Not Available | Positive | 535646 - 535912 | 9999.45 |
| large subunit ribosomal protein l40e | SAMN04488124_0582 | Not Available | Positive | 536024 - 536173 | 5652.87 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488124_0583 | Not Available | Negative | 536239 - 536871 | 23079.4 |
| hypothetical protein | SAMN04488124_0584 | Not Available | Positive | 537037 - 537213 | 6501.87 |
| hypothetical protein | SAMN04488124_0585 | Not Available | Positive | 537223 - 537843 | 21981.7 |
| dna polymerase | SAMN04488124_0586 | Not Available | Positive | 537869 - 538471 | 21560.1 |
| phosphonate transport system permease protein | SAMN04488124_0587 | Not Available | Negative | 538527 - 539492 | 35307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.