Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdc6-related protein, aaa superfamily atpase | SAMN04488124_3612 | Not Available | Positive | 3543557 - 3544720 | 42219.7 |
| iron complex transport system substrate-binding protein | SAMN04488124_3613 | Not Available | Negative | 3544904 - 3546112 | 44630.1 |
| iron complex transport system atp-binding protein | SAMN04488124_3614 | Not Available | Negative | 3546160 - 3547008 | 31221.5 |
| iron complex transport system permease protein | SAMN04488124_3615 | Not Available | Negative | 3547008 - 3548147 | 39711.5 |
| carbon-nitrogen hydrolase | SAMN04488124_3616 | Not Available | Positive | 3548251 - 3549051 | 28813.5 |
| predicted purr-regulated permease perm | SAMN04488124_3617 | Not Available | Positive | 3549130 - 3550320 | 42494.9 |
| membrane protein | SAMN04488124_3618 | Not Available | Positive | 3550372 - 3551505 | 39287.3 |
| ph domain-containing protein | SAMN04488124_3619 | Not Available | Positive | 3551631 - 3552170 | 20539.4 |
| putative mrna 3-end processing factor | SAMN04488124_3620 | Not Available | Negative | 3552200 - 3553432 | 44967.7 |
| atp-binding cassette, subfamily b | SAMN04488124_3621 | Not Available | Positive | 3553550 - 3555445 | 68885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.