Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 3493642 - 3493715 | Not Available |
| dhha1 domain-containing protein | SAMN04488124_3571 | Not Available | Positive | 3493933 - 3495360 | 50832.8 |
| sporulation protein ylmc, prc-barrel domain family | SAMN04488124_3572 | Not Available | Negative | 3495394 - 3495690 | 10997.1 |
| fad/fmn-containing dehydrogenase | SAMN04488124_3573 | Not Available | Positive | 3495999 - 3499127 | 112769.0 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488124_3574 | Not Available | Negative | 3499157 - 3500299 | 39826.9 |
| predicted transcriptional regulator, contains hth domain | SAMN04488124_3575 | Not Available | Negative | 3500382 - 3501170 | 28458.3 |
| uri superfamily endonuclease | SAMN04488124_3576 | Not Available | Negative | 3501374 - 3501877 | 17484.2 |
| protein of unknown function, duf393 | SAMN04488124_3577 | Not Available | Negative | 3501878 - 3502306 | 15548.8 |
| dead/deah box helicase domain-containing protein | SAMN04488124_3578 | Not Available | Positive | 3502436 - 3504811 | 87637.0 |
| hpp family protein | SAMN04488124_3579 | Not Available | Negative | 3504775 - 3505302 | 17920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.