Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | SAMN04488124_3560 | Not Available | Negative | 3484109 - 3485599 | 56861.2 |
| threonyl-trna synthetase | SAMN04488124_3561 | Not Available | Positive | 3485750 - 3487675 | 73048.4 |
| hypothetical protein | SAMN04488124_3562 | Not Available | Negative | 3487680 - 3489158 | 53593.7 |
| hypothetical protein | SAMN04488124_3563 | Not Available | Negative | 3489206 - 3489760 | 21223.6 |
| predicted arabinose efflux permease, mfs family | SAMN04488124_3564 | Not Available | Negative | 3489821 - 3491101 | 44449.3 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488124_3565 | Not Available | Negative | 3491155 - 3492114 | 33348.6 |
| hypothetical protein | SAMN04488124_3566 | Not Available | Negative | 3492154 - 3492273 | 4709.01 |
| dna-binding transcriptional regulator, lrp family | SAMN04488124_3567 | Not Available | Positive | 3492311 - 3492799 | 18473.7 |
| hypothetical protein | SAMN04488124_3568 | Not Available | Positive | 3492924 - 3493280 | 13160.3 |
| hypothetical protein | SAMN04488124_3569 | Not Available | Negative | 3493200 - 3493418 | 7300.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.