Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN04488124_3490 | Not Available | Negative | 3418302 - 3418988 | 25137.8 |
| hypothetical protein | SAMN04488124_3491 | Not Available | Negative | 3419039 - 3419428 | 13547.4 |
| hypothetical protein | SAMN04488124_3492 | Not Available | Negative | 3419488 - 3420279 | 29617.8 |
| putative sos response-associated peptidase yedk | SAMN04488124_3493 | Not Available | Positive | 3420390 - 3421100 | 26420.5 |
| hypothetical protein | SAMN04488124_3494 | Not Available | Positive | 3422682 - 3423104 | 15635.6 |
| site-specific recombinase xerd | SAMN04488124_3495 | Not Available | Positive | 3423094 - 3424149 | 39785.5 |
| protein of unknown function | SAMN04488124_3496 | Not Available | Positive | 3424459 - 3425937 | 53807.8 |
| hypothetical protein | SAMN04488124_3497 | Not Available | Negative | 3425955 - 3426851 | 32240.8 |
| hypothetical protein | SAMN04488124_3498 | Not Available | Negative | 3426898 - 3428589 | 60257.0 |
| l-ascorbate 6-phosphate lactonase | SAMN04488124_3499 | Not Available | Negative | 3428656 - 3429495 | 30946.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.