Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase, c-terminal domain | SAMN04488124_3420 | Not Available | Negative | 3344885 - 3345595 | 25064.1 |
| dihydroxyacetone kinase, n-terminal domain | SAMN04488124_3421 | Not Available | Negative | 3345688 - 3346683 | 35161.3 |
| isoleucyl-trna synthetase | SAMN04488124_3422 | Not Available | Negative | 3346835 - 3349966 | 118214.0 |
| hypothetical protein | SAMN04488124_3423 | Not Available | Negative | 3350038 - 3350625 | 21565.1 |
| hypothetical protein | SAMN04488124_3424 | Not Available | Negative | 3350751 - 3351209 | 17228.2 |
| hypothetical protein | SAMN04488124_3425 | Not Available | Negative | 3351278 - 3351745 | 16736.5 |
| helix-turn-helix domain-containing protein | SAMN04488124_3426 | Not Available | Negative | 3351828 - 3352442 | 21286.4 |
| cbs domain-containing protein | SAMN04488124_3427 | Not Available | Negative | 3352560 - 3352934 | 13320.7 |
| hydroxypyruvate reductase | SAMN04488124_3428 | Not Available | Negative | 3353016 - 3354368 | 45896.5 |
| trab family protein | SAMN04488124_3429 | Not Available | Positive | 3354422 - 3356098 | 58406.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.