Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_3390 | Not Available | Negative | 3305681 - 3306001 | 11806.5 |
| hypothetical protein | SAMN04488124_3391 | Not Available | Negative | 3306223 - 3306804 | 21672.4 |
| hypothetical protein | SAMN04488124_3392 | Not Available | Positive | 3307006 - 3307503 | 17112.2 |
| hypothetical protein | SAMN04488124_3393 | Not Available | Positive | 3307596 - 3308303 | 24976.4 |
| spermidine synthase | SAMN04488124_3394 | Not Available | Positive | 3308335 - 3310113 | 65516.9 |
| protein of unknown function duf2617 | SAMN04488124_3395 | Not Available | Positive | 3310110 - 3310733 | 22343.1 |
| hypothetical protein | SAMN04488124_3396 | Not Available | Positive | 3310730 - 3311665 | 33640.4 |
| pentapeptide repeat-containing protein | SAMN04488124_3397 | Not Available | Positive | 3311783 - 3314248 | 90975.3 |
| pgf-cterm protein/surface glycoprotein | SAMN04488124_3398 | Not Available | Positive | 3314470 - 3316833 | 81494.0 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04488124_3399 | Not Available | Positive | 3317122 - 3317772 | 22202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.