Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488124_3349 | Not Available | Positive | 3256269 - 3257237 | 35935.1 |
| carbohydrate binding module (family 6) | SAMN04488124_3350 | Not Available | Negative | 3257338 - 3258789 | 50803.1 |
| predicted dehydrogenase | SAMN04488124_3351 | Not Available | Negative | 3259104 - 3260252 | 41906.4 |
| udp-glucose 4-epimerase | SAMN04488124_3352 | Not Available | Positive | 3260517 - 3261440 | 32386.4 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488124_3353 | Not Available | Negative | 3261577 - 3262125 | 20292.3 |
| hypothetical protein | SAMN04488124_3354 | Not Available | Positive | 3262331 - 3262480 | 5462.4 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488124_3355 | Not Available | Negative | 3262557 - 3263681 | 40310.8 |
| l-iditol 2-dehydrogenase | SAMN04488124_3357 | Not Available | Negative | 3264063 - 3265094 | 36418.7 |
| hypothetical protein | SAMN04488124_3358 | Not Available | Positive | 3265242 - 3267425 | 77152.6 |
| long-chain acyl-coa synthetase | SAMN04488124_3359 | Not Available | Positive | 3267538 - 3269202 | 60376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.