Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_3327 | Not Available | Negative | 3230247 - 3230423 | 6516.52 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488124_3328 | Not Available | Positive | 3230630 - 3231427 | 27928.5 |
| sugar phosphate permease | SAMN04488124_3329 | Not Available | Positive | 3231516 - 3232682 | 39992.3 |
| hypothetical protein | SAMN04488124_3330 | Not Available | Positive | 3233106 - 3233390 | 10633.5 |
| repeat domain-containing protein | SAMN04488124_3331 | Not Available | Positive | 3233805 - 3235046 | 45849.2 |
| hypothetical protein | SAMN04488124_3332 | Not Available | Negative | 3235254 - 3235640 | 14066.8 |
| polysaccharide transporter, pst family | SAMN04488124_3333 | Not Available | Negative | 3235741 - 3237261 | 55917.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488124_3334 | Not Available | Positive | 3237769 - 3239088 | 48229.9 |
| uncharacterized conserved protein, heparinase superfamily | SAMN04488124_3335 | Not Available | Positive | 3239081 - 3240997 | 70824.4 |
| glycosyltransferase, gt2 family | SAMN04488124_3336 | Not Available | Positive | 3241218 - 3241991 | 28512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.