Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dna binding protein, contains hth domain | SAMN04488124_3287 | Not Available | Positive | 3184510 - 3185208 | 25767.9 |
| morn repeat variant | SAMN04488124_3288 | Not Available | Negative | 3185239 - 3185751 | 19910.5 |
| subtilisin | SAMN04488124_3289 | Not Available | Negative | 3185831 - 3187675 | 64185.3 |
| transcriptional regulator, hxlr family | SAMN04488124_3290 | Not Available | Positive | 3187915 - 3188292 | 14048.6 |
| protein of unknown function | SAMN04488124_3291 | Not Available | Positive | 3188393 - 3189958 | 54191.9 |
| hypothetical protein | SAMN04488124_3292 | Not Available | Negative | 3189981 - 3191378 | 49779.8 |
| pas domain s-box-containing protein | SAMN04488124_3293 | Not Available | Negative | 3191778 - 3192341 | 20917.4 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN04488124_3294 | Not Available | Positive | 3192610 - 3193989 | 50177.5 |
| glutamate or tyrosine decarboxylase | SAMN04488124_3295 | Not Available | Positive | 3194080 - 3195531 | 52297.4 |
| hypothetical protein | SAMN04488124_3296 | Not Available | Negative | 3195564 - 3196370 | 28788.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.