Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator, contains hth domain | SAMN04488124_3277 | Not Available | Negative | 3170912 - 3171739 | 30565.1 |
| hypothetical protein | SAMN04488124_3278 | Not Available | Positive | 3172104 - 3172466 | 13453.0 |
| gaf and hth_10 associated domain-containing protein | SAMN04488124_3279 | Not Available | Positive | 3172542 - 3174104 | 56653.6 |
| pas domain s-box-containing protein | SAMN04488124_3280 | Not Available | Positive | 3174262 - 3177045 | 101752.0 |
| hypothetical protein | SAMN04488124_3281 | Not Available | Positive | 3177364 - 3178335 | 35562.8 |
| hypothetical protein | SAMN04488124_3282 | Not Available | Positive | 3178619 - 3179599 | 35658.9 |
| hypothetical protein | SAMN04488124_3283 | Not Available | Negative | 3179775 - 3179942 | 5802.75 |
| disa checkpoint controller nucleotide-binding | SAMN04488124_3284 | Not Available | Positive | 3180406 - 3180924 | 19226.7 |
| hypothetical protein | SAMN04488124_3285 | Not Available | Positive | 3181305 - 3182276 | 34739.0 |
| parallel beta-helix repeat (two copies) | SAMN04488124_3286 | Not Available | Negative | 3182924 - 3183445 | 18157.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.