Halogeometricum limi

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum limi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum limi strain CGMCC 1.8711 genome assembly, contig:

Gene Summary

Adenine Count

613622 bp

Thymine Count

621246 bp

Guanine Count

1187391 bp

Cytosine Count

1193980 bp

Genome Length

3616269 bp

Protein-coding Genes

3607 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical phage tail region proteinSAMN04488124_3146Not AvailablePositive3015711 - 301617817122.5
aaa+-type atpase, spovk/ycf46/vps4 familySAMN04488124_3147Not AvailablePositive3016175 - 301849086024.9
hypothetical proteinSAMN04488124_3148Not AvailablePositive3019130 - 302025741200.8
lysm domain-containing proteinSAMN04488124_3149Not AvailablePositive3020258 - 302091424446.0
uncharacterized conserved protein, implicated in type vi secretion and phage assemblySAMN04488124_3150Not AvailablePositive3020915 - 302267562839.7
zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretionSAMN04488124_3151Not AvailablePositive3022708 - 30229808726.27
hypothetical proteinSAMN04488124_3152Not AvailablePositive3022983 - 302337814432.7
putative baseplate assembly proteinSAMN04488124_3153Not AvailablePositive3023379 - 3027101132513.0
putative baseplate assembly proteinSAMN04488124_3154Not AvailablePositive3027098 - 302916774804.8
phage tail protein domain-containing proteinSAMN04488124_3155Not AvailablePositive3029164 - 303131178591.8

Displaying genes 3131 – 3140 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.