Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transport system substrate-binding protein | SAMN04488124_3136 | Not Available | Positive | 3006332 - 3007423 | 40216.2 |
| zinc transport system atp-binding protein | SAMN04488124_3137 | Not Available | Positive | 3007420 - 3008196 | 27411.3 |
| zinc transport system permease protein | SAMN04488124_3138 | Not Available | Positive | 3008193 - 3009203 | 34717.0 |
| iron (metal) dependent repressor, dtxr family | SAMN04488124_3139 | Not Available | Positive | 3009205 - 3009930 | 26205.2 |
| protein of unknown function | SAMN04488124_3140 | Not Available | Positive | 3010156 - 3010815 | 24041.2 |
| hypothetical protein | SAMN04488124_3141 | Not Available | Positive | 3010808 - 3011542 | 25594.6 |
| phage tail sheath protein fi | SAMN04488124_3142 | Not Available | Positive | 3011632 - 3014580 | 105084.0 |
| conserved hypothetical phage tail region protein | SAMN04488124_3143 | Not Available | Positive | 3014604 - 3015047 | 16485.3 |
| hypothetical protein | SAMN04488124_3144 | Not Available | Positive | 3015044 - 3015517 | 16781.5 |
| hypothetical protein | SAMN04488124_3145 | Not Available | Positive | 3015514 - 3015711 | 7909.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.