Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_3073 | Not Available | Negative | 2942103 - 2942291 | 7093.21 |
| helix-hairpin-helix domain-containing protein | SAMN04488124_3074 | Not Available | Positive | 2942428 - 2942946 | 18568.6 |
| hypothetical protein | SAMN04488124_3075 | Not Available | Positive | 2943209 - 2944039 | 30256.3 |
| glyoxalase family protein | SAMN04488124_3076 | Not Available | Positive | 2944299 - 2945237 | 35136.1 |
| phospholipase/carboxylesterase | SAMN04488124_3077 | Not Available | Positive | 2945237 - 2945908 | 22939.8 |
| protein of unknown function | SAMN04488124_3078 | Not Available | Negative | 2945970 - 2946323 | 12825.7 |
| catechol 2,3-dioxygenase | SAMN04488124_3079 | Not Available | Negative | 2946404 - 2947240 | 30184.1 |
| sugar phosphate isomerase/epimerase | SAMN04488124_3080 | Not Available | Positive | 2947743 - 2948567 | 29971.5 |
| ribose transport system substrate-binding protein | SAMN04488124_3081 | Not Available | Positive | 2948801 - 2949817 | 36508.6 |
| ribose transport system substrate-binding protein | SAMN04488124_3082 | Not Available | Positive | 2950383 - 2951555 | 41924.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.