Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase family protein | SAMN04488124_3063 | Not Available | Positive | 2930274 - 2931269 | 36779.3 |
| oligo-1,6-glucosidase | SAMN04488124_3064 | Not Available | Negative | 2931309 - 2933036 | 65708.0 |
| pkd domain-containing protein | SAMN04488124_3065 | Not Available | Negative | 2933120 - 2935849 | 96309.2 |
| hypothetical protein | SAMN04488124_3066 | Not Available | Positive | 2936185 - 2936691 | 17839.9 |
| hypothetical protein | SAMN04488124_3067 | Not Available | Positive | 2936693 - 2937283 | 20928.6 |
| mannose or cellobiose epimerase, n-acyl-d-glucosamine 2-epimerase family | SAMN04488124_3068 | Not Available | Positive | 2937452 - 2938654 | 45748.2 |
| sugar phosphate isomerase/epimerase | SAMN04488124_3069 | Not Available | Positive | 2938715 - 2939446 | 26564.1 |
| lexa-binding, inner membrane-associated putative hydrolase | SAMN04488124_3070 | Not Available | Negative | 2939515 - 2940060 | 19806.7 |
| hypothetical protein | SAMN04488124_3071 | Not Available | Positive | 2940295 - 2941203 | 30744.1 |
| 3-keto-5-aminohexanoate cleavage enzyme | SAMN04488124_3072 | Not Available | Negative | 2941258 - 2942106 | 30747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.