Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | SAMN04488124_2982 | Not Available | Negative | 2842260 - 2843015 | 27248.0 |
| branched-chain amino acid transport system permease protein | SAMN04488124_2983 | Not Available | Negative | 2843012 - 2844937 | 68003.8 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04488124_2984 | Not Available | Negative | 2844947 - 2846260 | 46276.5 |
| d-lactate dehydrogenase (cytochrome) | SAMN04488124_2985 | Not Available | Positive | 2846379 - 2847758 | 49024.3 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04488124_2986 | Not Available | Positive | 2847835 - 2848992 | 43295.3 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04488124_2987 | Not Available | Positive | 2848989 - 2849963 | 35466.2 |
| transcriptional regulator, iclr family | SAMN04488124_2988 | Not Available | Positive | 2850143 - 2850901 | 27169.9 |
| duf218 domain-containing protein | SAMN04488124_2989 | Not Available | Positive | 2851415 - 2851981 | 21076.6 |
| threonine dehydrogenase | SAMN04488124_2990 | Not Available | Positive | 2852182 - 2853252 | 38845.9 |
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN04488124_2991 | Not Available | Positive | 2853359 - 2854504 | 39351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.