Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04488124_2750 | Not Available | Positive | 2606427 - 2607086 | 23991.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488124_2751 | Not Available | Negative | 2607101 - 2607994 | 32240.8 |
| hth dna binding domain-containing protein | SAMN04488124_2752 | Not Available | Positive | 2608078 - 2608752 | 24146.3 |
| hypothetical protein | SAMN04488124_2753 | Not Available | Positive | 2608820 - 2609263 | 16036.8 |
| reca-superfamily atpase, kaic/gvpd/rad55 family | SAMN04488124_2754 | Not Available | Negative | 2609275 - 2610828 | 57646.8 |
| hypothetical protein | SAMN04488124_2755 | Not Available | Positive | 2610934 - 2611836 | 33373.5 |
| pas domain s-box-containing protein | SAMN04488124_2756 | Not Available | Positive | 2611983 - 2612984 | 36960.1 |
| phosphoserine aminotransferase, putative | SAMN04488124_2757 | Not Available | Positive | 2613078 - 2614190 | 41753.6 |
| o-succinylbenzoate synthase | SAMN04488124_2758 | Not Available | Negative | 2614223 - 2615272 | 39438.1 |
| hypothetical protein | SAMN04488124_2759 | Not Available | Negative | 2615370 - 2615978 | 21943.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.