Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_2710 | Not Available | Negative | 2567528 - 2567839 | 10868.6 |
| ketopantoate hydroxymethyltransferase | SAMN04488124_2711 | Not Available | Positive | 2567952 - 2568761 | 28705.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488124_2712 | Not Available | Negative | 2568777 - 2569553 | 28145.8 |
| hypothetical protein | SAMN04488124_2713 | Not Available | Positive | 2569719 - 2569967 | 8996.33 |
| transitional endoplasmic reticulum atpase | SAMN04488124_2714 | Not Available | Positive | 2569964 - 2572228 | 82822.5 |
| peroxiredoxin q/bcp | SAMN04488124_2715 | Not Available | Negative | 2572469 - 2572936 | 17070.3 |
| dna replication factor gins | SAMN04488124_2716 | Not Available | Negative | 2573009 - 2573986 | 34061.8 |
| dna primase small subunit | SAMN04488124_2717 | Not Available | Negative | 2573983 - 2575140 | 42742.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN04488124_2718 | Not Available | Positive | 2575434 - 2576975 | 55891.8 |
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN04488124_2719 | Not Available | Positive | 2577022 - 2578050 | 37434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.