Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shs2 domain-containing protein | SAMN04488124_2700 | Not Available | Negative | 2558501 - 2558914 | 14929.2 |
| uncharacterized membrane protein | SAMN04488124_2701 | Not Available | Negative | 2558911 - 2560080 | 41994.2 |
| acetyltransferase (gnat) family protein | SAMN04488124_2702 | Not Available | Positive | 2560208 - 2560684 | 18367.5 |
| gyd domain-containing protein | SAMN04488124_2703 | Not Available | Negative | 2560718 - 2561005 | 10877.5 |
| sugar phosphate isomerase/epimerase | SAMN04488124_2704 | Not Available | Positive | 2561100 - 2562068 | 35967.0 |
| predicted dehydrogenase | SAMN04488124_2705 | Not Available | Positive | 2562142 - 2563254 | 40955.9 |
| hypothetical protein | SAMN04488124_2706 | Not Available | Negative | 2563277 - 2563660 | 14270.1 |
| protein of unknown function | SAMN04488124_2707 | Not Available | Negative | 2563657 - 2565903 | 80551.2 |
| hypothetical protein | SAMN04488124_2708 | Not Available | Negative | 2566110 - 2566487 | 13816.3 |
| translation initiation factor eif-2b subunit delta | SAMN04488124_2709 | Not Available | Negative | 2566598 - 2567446 | 30462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.