Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease j | SAMN04488124_2680 | Not Available | Negative | 2540802 - 2542154 | 50125.6 |
| small ribonucleoprotein | SAMN04488124_2681 | Not Available | Positive | 2542524 - 2542757 | 8254.62 |
| large subunit ribosomal protein l37e | SAMN04488124_2682 | Not Available | Positive | 2542754 - 2542930 | 6408.62 |
| amidophosphoribosyltransferase | SAMN04488124_2683 | Not Available | Positive | 2543234 - 2544787 | 56025.0 |
| pas domain s-box-containing protein | SAMN04488124_2684 | Not Available | Positive | 2544875 - 2547478 | 94464.4 |
| hypothetical protein | SAMN04488124_2685 | Not Available | Positive | 2547589 - 2547885 | 11207.2 |
| putative membrane protein | SAMN04488124_2686 | Not Available | Negative | 2547976 - 2548536 | 20344.7 |
| Trna-leu | Not Available | Not Available | Positive | 2548684 - 2548768 | Not Available |
| luciferase family oxidoreductase, group 1 | SAMN04488124_2688 | Not Available | Negative | 2548947 - 2549984 | 36869.8 |
| transcriptional regulator, xre family | SAMN04488124_2689 | Not Available | Positive | 2550110 - 2550625 | 18319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.