Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l21e | SAMN04488124_2650 | Not Available | Positive | 2514177 - 2514467 | 10701.9 |
| dna-directed rna polymerase, subunit f | SAMN04488124_2651 | Not Available | Positive | 2514480 - 2514836 | 13708.0 |
| putative nucleotide binding protein | SAMN04488124_2652 | Not Available | Positive | 2515131 - 2515766 | 24398.1 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN04488124_2653 | Not Available | Positive | 2515814 - 2516683 | 31979.6 |
| small-conductance mechanosensitive channel | SAMN04488124_2654 | Not Available | Positive | 2516688 - 2517986 | 46580.6 |
| release factor glutamine methyltransferase | SAMN04488124_2655 | Not Available | Positive | 2517983 - 2518591 | 22201.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN04488124_2656 | Not Available | Positive | 2518651 - 2519658 | 36487.6 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN04488124_2657 | Not Available | Positive | 2519658 - 2520731 | 40490.7 |
| ferredoxin | SAMN04488124_2658 | Not Available | Negative | 2520900 - 2521211 | 11646.0 |
| selenium-binding protein 1 | SAMN04488124_2659 | Not Available | Negative | 2521208 - 2522590 | 51580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.