Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04488124_2609 | Not Available | Positive | 2483934 - 2484872 | 31364.7 |
| thioredoxin | SAMN04488124_2610 | Not Available | Negative | 2484838 - 2485206 | 13100.3 |
| Trna-ser | Not Available | Not Available | Positive | 2485467 - 2485551 | Not Available |
| small subunit ribosomal protein s13 | SAMN04488124_2612 | Not Available | Positive | 2485571 - 2486092 | 19494.4 |
| ssu ribosomal protein s4p | SAMN04488124_2613 | Not Available | Positive | 2486092 - 2486619 | 20116.6 |
| ssu ribosomal protein s11p | SAMN04488124_2614 | Not Available | Positive | 2486623 - 2487018 | 13588.0 |
| dna-directed rna polymerase subunit d | SAMN04488124_2615 | Not Available | Positive | 2487028 - 2487810 | 28415.2 |
| Trna-leu | Not Available | Not Available | Positive | 2487978 - 2488062 | Not Available |
| large subunit ribosomal protein l18e | SAMN04488124_2617 | Not Available | Positive | 2488090 - 2488440 | 12754.2 |
| large subunit ribosomal protein l13 | SAMN04488124_2618 | Not Available | Positive | 2488437 - 2488874 | 16028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.